From: Integrating alternative splicing detection into gene prediction
AraSet sequence | Gene ID | EST evidence | TIGR | AtGDB | AS status | Note |
---|---|---|---|---|---|---|
seq14 | At2g47640 | AI998209 | Y | N | ACC | skip 3 nt |
seq16 | At2g39780 | AV832175 | N | N | -EX | incorrect alignments |
seq50 | At5g46290 | CF652136 | N | N | +IN | non consensus splice sites |
seq53 | At3g51800 | AV544387 | Y | Y | ACC | add 27 nt |
seq62 | At4g37070 | AU236122 | Y | Y | DON | add 33 nt |
seq62 | At4g37050 | AV542276 | N | N | FP | overlapping genes |
seq65 | At2g44100 | BE521212 | N | N | FP | incomplete splicing |
seq65 | At2g44120 | BE524396 | Y | N | ACC | skip 33 nt |
seq69 | At4gl4350 | AV547538 | Y | Y | +IN | skip 105 nt |