Table 5 Comparative time in seconds required by Pentium IV computer to annotate a set of genes containing micro-exons. BLASTN running time is included in GIGOgene timing.
From: A method of precise mRNA/DNA homology-based gene structure prediction
Sim4 | Spidey | BLAT | Galahad | GIGOgene | EST2genome |
|---|---|---|---|---|---|
3.705 sec. | 11.419 sec. | 16.029 sec. | 170.333 sec. | 1504.444 sec. | 5323.904 sec. |