Table 1 Illustration of noise reduction, pvalue conversion and normalization on the feature vectors associated with proteins d 1qmva_ (Thioredoxin peroxidase 2) (denoted by c.47.1.10.3) and d 1hd 2a_ (Peroxiredoxin 5) (denoted by c.47.1.10.4). We display the 2163th up to the 2170th entries of the different feature vectors. The zscore cutoff value τ is set at 3.5. The feature vector for c.47.1.10.3 reaches its maximum at the 2165th position which corresponds to the self-alignment zscore.

P ^score

c.47.1.10.3

0

5.170

63.210

6.420

15.790

4.150

0

1.590

c.47.1.10.4

1.980

1.730

7.070

53.530

6.380

3.290

0

0

${\widehat{P}}^{score}$

c.47.1.10.3

0

5.170

63.210

6.420

15.790

4.150

0

0

c.47.1.10.4

0

0

7.070

53.530

6.380

0

0

0

P ^pvalue

c.47.1.10.3

0

0.998916

0.999921

0.999163

0.999619

0.996863

0

0

c.47.1.10.4

0

0

0.999234

0.999888

0.999158

0

0

0

P ^prob

c.47.1.10.3

0

0.052803

0.052856

0.052816

0.052840

0.052694

0

0

c.47.1.10.4

0

0

0.077210

0.077260

0.077204

0

0

0