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Table 3 European population and consensus block overlap. Percentage of total sequence common to each method's consensus blocks defined from bootstrap subsamples of 96 chromosomes and population partition using all SNPs with at least a 10% MAF.
From:
Analysis of concordance of different haplotype block partitioning algorithms
consensus threshold
HapBlock
Gabriel's Method
MDBlocks
100
20%
17%
31%
90
55%
45%
66%
80
72%
53%
76%
70
77%
57%
78%
60
78%
61%
81%
50
79%
65%
81%
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