Table 3 European population and consensus block overlap. Percentage of total sequence common to each method's consensus blocks defined from bootstrap subsamples of 96 chromosomes and population partition using all SNPs with at least a 10% MAF.
From: Analysis of concordance of different haplotype block partitioning algorithms
| consensus threshold | HapBlock | Gabriel's Method | MDBlocks |
|---|---|---|---|
| 100 | 20% | 17% | 31% |
| 90 | 55% | 45% | 66% |
| 80 | 72% | 53% | 76% |
| 70 | 77% | 57% | 78% |
| 60 | 78% | 61% | 81% |
| 50 | 79% | 65% | 81% |