Skip to main content

Table 5 Numbers of differentially expressed genes estimated from the IPF dataset. Columns show the normalization methods used to process the IPF dataset. Rows show the statistical tests performed to detect the numbers of differentially expressed genes (adjusted p-values < 0.05) from the normalized data. For each statistical test, the largest number of differentially expressed genes is shown in bold.

From: Comparison of normalization methods for CodeLink Bioarray data

  Median CyclicLoess Quantile Qspline
Welch's t-test 220 240 242 269
Wilcoxon test 108 164 127 136
Welch's t-test (perm) 279 331 314 319
Wilcoxon test (perm) 227 297 259 271