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Table 1 CoPub Mapper gene and keyword database information. Gene names, symbols and aliases were retrieved from Affymetrix HG_U95 / HG_U133 [54] and the HUGO databases [55]. The keyword thesauri include the three Gene Ontology subsections [41], diseases [56] and tissues/organs [57].

From: CoPub Mapper: mining MEDLINE based on search term co-publication

Thesaurus Data Source Number of terms Number of terms with MEDLINE hits Total number of MEDLINE citations
Gene Affymetrix HG_U95-133 HUGO 15,621 10,700 5,932,448
Molecular Function Gene Ontology 962 851 6,616,546
Cellular Component Gene Ontology 218 196 1,890,561
Biological Process Gene Ontology 767 621 3,455,950
Diseases Karolinska Institute 1475 1444 6,099,280
Tissues National Library of Medicine 309 307 9,083,831