Figure 3

Neighbor-joining trees of complete eukaryotic genome sequence analyses. (A) The intersection of fifteen eukaryotic genomes, 10 panorthologs (5094 amino acid positions, alpha = 1.01). (B) The intersection of genomes from twelve multicellular eukaryotes, 63 panorthologs (23,571 amino acid positions, alpha = 1.15). All nodes are supported significantly (>95%) in bootstrap analyses of neighbor-joining and maximum likelihood, with the exception of node indicated by an asterisk (94% with maximum likelihood) in (A).