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Figure 3 | BMC Bioinformatics

Figure 3

From: TMB-Hunt: An amino acid composition based method to screen proteomes for beta-barrel transmembrane proteins

Figure 3

TMB-Hunt performance over a range of discrimination scores. Accuracy (x), sensitivity (â–²) and PPV(â– ) of the predictor at range of discrimination score thresholds. The above results were taken for the predictor discriminating between bbtm and non-bbtm proteins, using the 'leave homologues out' cross-validation, with weighted amino acids and evolutionary information for the query sequence. Similar patterns were found with all settings i.e. using weighted amino acids, no evolutionary information, 'leave homologues out' cross-validation and discriminating between bbtm and ntm proteins.

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