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Figure 2 | BMC Bioinformatics

Figure 2

From: SNPHunter: a bioinformatic software for single nucleotide polymorphism data acquisition and management

Figure 2

The Gene View panel which gives a graphic illustration of all the SNPs within the gene of TNF (LocusLink ID: 7124). The height of a SNP bar indicates the heterozygosity of that SNP, and the four dotted horizontal lines means heterozygosity of 0, 0.25, 0.5, and 0.75 respectively. Out of 28 available SNPs, two have been dropped and plotted as "gray". For those 26 selected SNPs, "green" means "coding: synonymy unknown" or "synonymous"; "red" means "non synonymous"; "orange" means all the others. And for the convenience of SNP selection, there is a red triangle indicating the current focused SNP, which is SNP rs3093663.

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BMC Bioinformatics

ISSN: 1471-2105

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