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Table 8 Percentage of sequence families where DIALIGN-T is outperformed on BAliBASE 2.1 by other methods according to the column score. Notation as in Table 5.

From: DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment

Method ref1 ref2 ref3 ref4 ref5 Total
DIALIGN 2.2 26.83%+ 13.04%+ 16.67%+ 16.67%0 50.00%0 24.82%+
T-COFFEE 1.37 56.10%- 73.91%- 66.67%0 25.00%0 50.00%0 56.74%-
PROBCONS 1.09 80.49%- 82.61%- 75.00%- 25.00%0 66.67%- 74.47%-
POA V2 20.73%+ 26.09%0 08.33%+ 16.67%0 00.00%+ 18.44%+
MUSCLE 3.5 73.17%- 73.91%- 83.33%- 16.67%0 66.67%- 68.79%-
CLUSTAL W 1.83 52.44%- 69.57%- 50.00%0 16.67%0 08.33%+ 48.23%0