Table 3 The number of enzymes for selected metabolic pathways from KEGG.
From: Columba: an integrated database of proteins, structures, and annotations
Metabolic pathway | Enzyme total | CATH class | |||||
|---|---|---|---|---|---|---|---|
Total | with str. | coverage | a / b | a | b | Few | |
all pathways | 1 952 | 508 | 26,0 | 443 | 114 | 107 | 15 |
Fatty acid biosynthesis (path 1) | 14 | 7 | 50,0 | 6 | 0 | 2 | 0 |
Oxidative phosphorylation | 10 | 5 | 50,0 | 3 | 3 | 3 | 1 |
Streptomycin biosynthesis | 14 | 7 | 50,0 | 6 | 0 | 1 | 0 |
Pyrimidine metabolism | 59 | 30 | 50,8 | 29 | 6 | 5 | 0 |
Selenoamino acid metabolism | 21 | 11 | 52,3 | 11 | 2 | 2 | 1 |
Pentose phosphate pathway | 33 | 18 | 54,5 | 17 | 2 | 2 | 2 |
Methionine metabolism | 23 | 13 | 56,5 | 13 | 3 | 1 | 1 |
One carbon pool by folate | 23 | 13 | 56,5 | 13 | 2 | 1 | 0 |
Phe, Tyr and Trp biosynthesis | 31 | 19 | 61,2 | 18 | 6 | 2 | 0 |
Glycolysis / Gluconeogenesis | 38 | 24 | 63,1 | 24 | 2 | 5 | 2 |
Reductive carboxylate cycle (CO2 fixation) | 13 | 9 | 69,2 | 8 | 3 | 1 | 1 |
Aminoacyl-tRNA biosynthesis | 21 | 16 | 76,1 | 16 | 8 | 6 | 0 |
Carbon fixation | 23 | 18 | 78,2 | 18 | 2 | 3 | 0 |