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Table 3 Original GOC output in the toy example. GOC output for values of specificity s ∈ { -1,1,3}.

From: Protein annotation as term categorization in the gene ontology using word proximity networks

 

s = -1

s = 1

s = 3

Rank

p

p

p

1

0.7672

C

0.5467

H

0.3893

H

2

0.6798

1*

0.3867

C*

0.3333

A; J

3

0.6315

H

0.3333

A;I;J

  

4

0.5563

I

  

0.0617

C*

5

0.5164

B

  

0.0615

I

6

0.3333

A;J

0.2400

B*

0.0559

F;G;K

7

  

0.2267

1*

  

8

0.2981

F;G;K

0.2133

F;G;K

  

9

    

0.0112

B

10

    

0.0060

1