Reproducible Clusters from Microarray Research: Whither?

BMC Bioinformatics

Table 1 List of microarray datasets considered for the study. Table 1 contains two columns of datasets. Each dataset is described by its name, source, and sample size (n). Table 1 shows 39 datasets. The first 3 columns list 19 datasets and last three columns describe 18 datasets.

Name of the dataset	Source	Sample size (n)	Name of the dataset	Source	Sample size (n)
GDS22	GEO	80	Leukemia dataset	[30]	70
GDS171	GEO	30	Medulloblastoma Data Set	[31]	34
GDS184	GEO	30	Prostate Cancer dataset	[32]	100
GDS232	GEO	46	Gaffney Head and Neck data	[33]	60
GDS274	GEO	80	Affymetrix Hu133A Latin Square	[34]	42
GDS285	GEO	20	CNGI design experiment	Unpublished	24
GDS365	GEO	66	Paired pre and post euglycaemic insulin clamp skeletal muscle biopsies	Unpublished	106
GDS465	GEO	90	GDS156	GEO	12
GDS331	GEO	70	GDS254	GEO	16
GDS534	GEO	74	GDS268	GEO	24
GDS565	GEO	48	GDS287	GEO	16
GDS427	GEO	24	GDS288	GEO	16
GDS402	GEO	12	GDS472	GEO	14
GDS356	GEO	14	GDS473	GEO	12
GDS389	GEO	16	GDS511	GEO	12
GDS388	GEO	18	GDS520	GEO	20
GDS352	GEO	12	GDS564	GEO	28
GDS531	GEO	172	GDS540	GEO	18
GDS535	GEO	12

ISSN: 1471-2105