Skip to main content

Table 1 Q ok accuracy obtained with the four different decoding algorithms

From: A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins

Proteins

Viterbi

1-best

posterior

posterior-Viterbi

cross-validation

    

1a0spTOT

-

-

-

OK

1bxwaTOT

-

OK

OK

OK

1e54

-

-

OK

OK

lek9aTOT

-

-

OK

OK

1fcpaTOT

-

-

-

-

1fepTOT

-

-

-

OK

1i78a

-

-

OK

OK

1k24

-

-

-

OK

1kmoaTOT

-

-

OK

OK

1prn

-

-

-

-

1qd5a

-

-

OK

OK

1qj8a

-

-

OK

OK

2mpra

-

-

OK

OK

2omf

-

-

OK

OK

2por

-

-

-

-

<Q ok >

0.0

0.07

0.60

0.80

blind-test

    

1mm4

-

-

OK

-

1nqf

-

-

-

OK

1p4t

OK

OK

OK

OK

1uyn

-

-

-

OK

1t16

-

-

-

-

<Q ok >

0.20

0.20

0.40

0.60