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Table 1 Comparative analysis of sequence trimming by Lucy and MAGIC-SPP. Both Lucy and MAGIC-SPP were used with their default parameters. The adapter for this cDNA library had a length of 11 nucleotides. All sequences are 5' ESTs.

From: MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools

  Lucy MAGIC-SPP
Input sequences 17952 17952
Passing sequence reads 14490 15596
Sequence reads with at least one adapter remaining 2399 681
Average trimmed length in nucleotides 574 570
Total base calls in trimmed reads 8317260 8889720