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Table 1 Summary of antisense target genes and their predicted structures used in this study

From: Selection of antisense oligonucleotides based on multiple predicted target mRNA structures

Accession Description No. structures No. ODNs
X62295 Rattus mRNA for vascular type-1 angiotensin II receptor. 50 36
XM_051583 Homo sapiens v-raf-1 murine leukemia viral oncogene homolog 1 (RAF1), mRNA 50 31
M14758 Homo sapiens P-glycoprotein (PGY1) mRNA 50 22
NM_004996 Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 1, mRNA 50 14
M24283 Human intercellular adhesion molecule-1 (ICAM-1) 50 66
X52479 Human PKC alpha mRNA for protein kinase C alpha 37 19
NM_001078 Homo sapiens vascular cell adhesion molecule 1 (VCAM1), transcript variant 1, mRNA 50 35
XM_057446 Homo sapiens selectin E (endothelial adhesion molecule 1) (SELE), mRNA. 50 11
M30640 Human endothelial leukocyte adhesion molecule I (ELAM1) mRNA, complete cds 50 4
NM_000877 Homo sapiens interleukin 1 receptor, type I (IL1R1), mRNA. 50 20
M31585 Mouse (clone lambda-c5e) intercellular adhesion molecule 1 (ICAM-1) mRNA, complete cds 39 8
BC036531 Homo sapiens collagen, type I, alpha 1, mRNA (cDNA clone MGC:33668 IMAGE:5264710) 50 19
NM_010784 Mus musculus midkine (Mdk), mRNA 17 4
M15077 P.pyralis (firefly) luciferase gene, complete cds 39 8
X03484 Human mRNA for raf oncogene 50 20
X14805 Mus musculus mRNA for DNA methyltransferase 1 50 8
BC005976 Homo sapiens ras homolog gene family, member A, mRNA 23 13
M10843 Rabbit beta-globin mRNA 26 24
U45880 Human X-linked inhibitor of apotosis protein XIAP mRNA 36 6
AF015950 Human telomerase reverse transcriptase mRNA 50 5
NR_001566 Homo sapiens telomerase RNA component (TERC) on chromosome 3 23 5
M34309 Human epidermal growth factor receptor (HER3) mRNA, complete cds. 50 22
NM_004507 Homo sapiens HUS1 checkpoint homolog (S. pombe) (HUS1), mRNA. 33 11
AJ278710 Escherichia coli 23S rRNA gene, strain K12 DSM 30083T 50 7
X03363 Human c-erb-B-2 mRNA 50 3
M10988 Human tumor necrosis factor (TNF) mRNA 26 4
NM_000791 Homo sapiens dihydrofolate reductase (DHFR), mRNA. 50 7
NM_001168 Homo sapiens baculoviral IAP repeat-containing 5 (survivin) (BIRC5), mRNA 29 5
NM_013642 Mus musculus dual specificity phosphatase 1 (Dusp1), mRNA 37 8
AF025846 Co-reporter vector pRL-TK, complete sequence 50 4