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Table 5 Comparison of predictive performance with Naïve Bayes, Logistic regression, IBk and J48 classifier. More details for prediction accuracy measurement are given in the Methods section. The results were obtained by 5-fold cross-validation.

From: Prediction of cis/trans isomerization in proteins using PSI-BLAST profiles and secondary structure information

Methods Prediction accuracy (%)
  Q 2 MCC Sensitivity Specificity
SVM 71.5 0.43 70.7 72.2
Naïve Bayes 59.1 0.18 57.0 61.1
Logistic regression 58.7 0.17 56.6 60.8
IBk (K-nearest neighbors) 52.9 0.06 44.9 60.5
J48 (decision trees) 54.2 0.09 53.6 54.7