Table 2 Error Rate. The EPR index is an estimate of the percentage of true positives in the set. The Reference Index is the percentage of proteins from the reference set found to be in the set of interest. The LS index is the percentage of interactions where both interacting partners shared the same subcellular localisation. The correlation observed between the Evolutionary rate (ED) and the number of Interactions (I) is shown. Values in bold type had a P-value greater than 0.03
From: Protein protein interactions, evolutionary rate, abundance and age
Dataset | EPR Index (%) | Reference Index (%) | Localisation Similarity (%) | ED vs I |
|---|---|---|---|---|
INTACT_ITO | 15.7 | 13.59 | 33.33 | 0.0300 |
MIPS_GENETIC | 74.9 | 4.08 | 27.52 | 0.0051 |
MIPS_PHYSICAL | 55.3 | 22.66 | 30.16 | -0.0172 |
BIND | - | 24.78 | - | -0.0316 |
INTACT_UETZ | 42.4 | 31.64 | 33.38 | -0.0774 |
GRID | 43.9 | 23.05 | 33.46 | -0.1183 |
DIP_FULL | 41.8 | 42.72 | 38.67 | -0.1207 |
MINT | 31.6 | 27.1 | 37.01 | -0.1428 |
DIP_CORE | 73.9 | 100 | 51.11 | -0.1682 |
INTACT_GAVIN | 74.1 | 48.62 | 60.58 | -0.1715 |
INTACT_SMALL | 196 | 29.57 | 71.64 | -0.2081 |
INTACT_HO | 3.78 | 28.89 | 24.23 | -0.2270 |