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Figure 3 | BMC Bioinformatics

Figure 3

From: Choosing the best heuristic for seeded alignment of DNA sequences

Figure 3

Comparison of score seeds designed for noncoding HSPs. Comparison of score seeds using different score matrices (M0, M z and M nc ). The leftmost seed on each ROC curve has weight 12, while subsequent seeds decrease w by one. Score thresholds were chosen to produce similar fp rates for seeds of the same weight. Curves corresponding to score seeds under M nc and M z nearly coincide.

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