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Table 1 Extracting processes and identification results of ENACE

From: Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat

     Located in CDS   
ENACE processes AS types Meta-ENACE exons Pass Rule 1 Pass Rule 2 Pass Rule 3 Located in UTR* ENACE exons +
EH-m Cassette-on 270 219 172 92 24 116
  Retained intron 38 - 12 5 3 8
EM-h Cassette-on 315 260 208 98 22 120
  Retained intron 51 - 18 5 2 7
EH-r Cassette-on 49 44 39 26 3 28
  Retained intron 7 - 3 1 1 2
ER-h Cassette-on 328 244 194 85 2 87
  Retained intron 59 - 24 1 1 2
EM-r Cassette-on 255 210 169 74 31 105
  Retained intron 202 - 65 14 2 16
ER-m Cassette-on 2789 2017 1550 317 59 376
  Retained intron 679 - 220 40 17 57
Total   5042 2994 2674 758 167 925
  1. .* Rules 2 and 3 only apply to prediction of coding exons.