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Table 1 Extracting processes and identification results of ENACE

From: Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat

    

Located in CDS

  

ENACE processes

AS types

Meta-ENACE exons

Pass Rule 1

Pass Rule 2

Pass Rule 3

Located in UTR*

ENACE exons +

EH-m

Cassette-on

270

219

172

92

24

116

 

Retained intron

38

-

12

5

3

8

EM-h

Cassette-on

315

260

208

98

22

120

 

Retained intron

51

-

18

5

2

7

EH-r

Cassette-on

49

44

39

26

3

28

 

Retained intron

7

-

3

1

1

2

ER-h

Cassette-on

328

244

194

85

2

87

 

Retained intron

59

-

24

1

1

2

EM-r

Cassette-on

255

210

169

74

31

105

 

Retained intron

202

-

65

14

2

16

ER-m

Cassette-on

2789

2017

1550

317

59

376

 

Retained intron

679

-

220

40

17

57

Total

 

5042

2994

2674

758

167

925

  1. .* Rules 2 and 3 only apply to prediction of coding exons.