Table 2 Prophages and prophage-like elements integrated into the genome of B. subtilis. Column 1 lists the elements flanked by sequence repeats. Column 2 gives the location of the repeats. Column 3 and 4 list the number of pA and pN genes predicted for these GIs by SIGI-HMM. The two last columns indicate the offset of the GI from the sequence repeats. An offset of -1 means that the GI predicted by SIGI-HMM starts (ends) one gene after (before) the repeat. Positions are as in  and given in kbp.