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Table 2 Prophages and prophage-like elements integrated into the genome of B. subtilis. Column 1 lists the elements flanked by sequence repeats. Column 2 gives the location of the repeats. Column 3 and 4 list the number of pA and pN genes predicted for these GIs by SIGI-HMM. The two last columns indicate the offset of the GI from the sequence repeats. An offset of -1 means that the GI predicted by SIGI-HMM starts (ends) one gene after (before) the repeat. Positions are as in [9] and given in kbp.

From: Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models

Element Repeats # pA # pN Offset Begin Offset End
P1 202 – 213 10 1 0 -1
P2 555 – 567 10 1 -1 0
P6 2050 – 2060 9 0 0 0
Skin 2654 – 2701 32 31 0 0
P7 2725 – 2735 7 6 -6 0