Skip to main content
Figure 2 | BMC Bioinformatics

Figure 2

From: The 3of5 web application for complex and comprehensive pattern matching in protein sequences

Figure 2

The subpattern attempts. The sequence of the sliding window is investigated for matches of the total pattern for every start position k individually. The total pattern is first segregated into subpatterns that are analyzed in consecutive subpattern attempts. Adjacent subpatterns may not overlap but must be consecutive. A successful subpattern attempt leads to a subsolution (not displayed), and initiates a subpattern attempt with the adjacent subpattern. A total solution is obtained when the last subpattern has led to a subsolution.

Back to article page