Table 4 Posterior probabilities of being in each site class for the previously identified positively selected sites in the MHC data in [11].
From: Identification of physicochemical selective pressure on protein encoding nucleotide sequences
Previously identified sites | Posterior probabilities in the 4 categories with the same partition | ||||
|---|---|---|---|---|---|
ω0<1, γ0<1 | ω0, γ1 | (ω1, γ0) | (ω1, γ1) | ||
Volume-altering | 63 | 0.00 | 0.00 | 0.72 | 0.28 |
67 | 0.00 | 0.03 | 0.60 | 0.37 | |
97 | 0.00 | 0.00 | 0.01 | 0.99 | |
Polarity | 116 | 0.00 | 0.00 | 0.01 | 0.99 |
Charge | 45 | 0.00 | 0.28 | 0.00 | 0.72 |
114 | 0.00 | 0.39 | 0.00 | 0.61 | |
156 | 0.00 | 0.36 | 0.00 | 0.64 | |