Skip to main content

Table 1 Coverage of Affymetrix probe sets with GO terms

From: Amplification of the Gene Ontology annotation of Affymetrix probe sets

  MOE430 HG-U133
  Probe sets GO terms Probe sets GO terms
Source Total New Total New Total New Total New
0 22051 - 117761 - 23206 - 121031 -
1 24735 2756 144952 29095 26115 2978 147036 28298
2 9468 3 32332 1105 13917 9 41949 3705
3 12395 0 21792 3621 12657 0 20191 3605
1,2,3 24738 2759 149749 33821 26124 2987 154425 35608
  1. The total of probe sets in MOE430 and HG-U133 chips are 45,101 and 44,760, respectively. New: number of probe sets or annotations not covered by any source with a lower number. Source 0 are the annotations given by NetAffx; 1 are annotations taken from linked databases; 2 are annotations implied by association to terms in linked databases; 3 are annotations implied by GO terms in 0, 1, or 2. 1,2,3 are the union of the annotations of sources 1, 2, and 3.