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Table 1 Closest hits to known structures from the members of the path in Figure 1. This table lists the known atomic level 3D structures (PDB entry in column 2) that are most closely related to the proteins (accessions in column 1) contained in the path of Figure 1 (found with a PSI-BLAST started with the respective subsequence identified in the FAMILYSEARCHER procedure – round and inclusion E-value in columns 3 and 4). In the last two columns, we present the SCOP and CATH classifiers if available ("-": classifier not found).

From: Application of a sensitive collection heuristic for very large protein families: Evolutionary relationship between adipose triglyceride lipase (ATGL) and classic mammalian lipases

accession PDB entry round E-Value SCOP CATH
P16233 1GPL 1 0.0 c.69.1.19 3.40.50.1820.28.2.1
AAT95008 1GPL 1 1E-013 - -
  1ETH 1 6E-11 c.69.1.19 3.40.50.1820.28.6.1
NP_946830 1VJ5 3 2E-12 c.69.1.11 -
  1VA4 3 8E-11 c.69.1.12 -
  1EK1 3 1E-10 c.69.1.11 -
  1A88 3 2E-08 c.69.1.12 3.40.50.1820.12.5.1
  1B6G 3 2E-07 c.69.1.8 3.40.50.1820.6.1.1
NP_771800 1VJ5 3 4E-16 c.69.1.11 -
  1EK1 3 2E-15 c.69.1.11 -
  1UKB 3 4E-14 c.69.1.10 3.40.50.1820.20.1.1
  1VA4 3 1E-13 c.69.1.12 -
  1C4X 3 8E-11 c.69.1.10 3.40.50.1820.50.1.1
YP_049079 1VA4 2 9E-06 c.69.1.12 -
  1JFR 2 2E-04 c.69.1.16 3.40.50.1820.37.1.1
  1TQH 3 2E-17 c.69.1.29 -
  1R1D 3 4E-16 c.69.1.29 -
  1VE7 3 9E-15 - -
NP_693664 1VA4 2 7E-05 c.69.1.12 -
  1PFQ 3 3E-17 c.69.1.24 3.40.50.1820.32.2.1
  1J2E 3 3E-17 c.69.1.24 3.40.50.1820.32.2.1
  1TKR 3 3E-17 c.69.1.24 3.40.50.1820.32.2.1
  1R9M 3 3E-17 c.69.1.24 3.40.50.1820.32.2.1
NP_296855 1VJ5 5 3E-07 c.69.1.11 -
  1EK1 5 5E-07 c.69.1.11 -
  1A8S 7 4E-07 c.69.1.12 3.40.50.1820.12.4.1
  1VA4 7 7E-07 c.69.1.12 -
  1BRT 7 2E-06 c.69.1.12 3.40.50.1820.12.1.1
NP_799564 1VJ5 3 1E-09 c.69.1.11 -
  1EK1 3 1E-08 c.69.1.11 -
  1A8S 3 5E-08 c.69.1.12 3.40.50.1820.12.4.1
  1VA4 3 6E-08 c.69.1.12 -
  1A8Q 3 3E-07 c.69.1.12 3.40.50.1820.12.3.1
YP_013380 1EHY 2 3E-19 c.69.1.11 3.40.50.1820.42.1.1
  1VA4 2 5E-11 c.69.1.12 -
  1A8S 2 3E-10 c.69.1.12 3.40.50.1820.12.4.1
  1BN6 2 3E-09 c.69.1.8 3.40.50.1820.2.2.1
  1CQW 2 4E-09 c.69.1.8 3.40.50.1820.2.2.2
EAL03661 1OXW 5 1E-11 c.19.1.3 -
CAA27571 1OXW 1 6E-90 c.19.1.3 -