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Figure 10 | BMC Bioinformatics

Figure 10

From: Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change

Figure 10

Comparison of the Dynalign/LIBSVM classifier with RNAz for sequence pairs of all identities. ROC curves for the Dynalign/LIBSVM classifier (blue) and RNAz (red), both based on a test set of 38,069 5S rRNA sequence pairs, 52,470 tRNA sequence pairs, plus two negative sequence pairs generated from each real sequence pair – one by a columnwise shuffle of a global alignment, one by an Altschul-Erikson dinucleotide shuffle of each sequence in the pair separately, yielding 90,539 real trial sequence pairs and 181,078 negative trial sequence pairs.

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