Table 3 Summary of significant results, classified according to the genes examined. The fractions refer to number of significant results/total number of comparisons for each pair of orthologous genes. The hypothesis of identical number of positives among genes was tested as described in Table 1. ns: non-significant after Bonferroni's correction (p > 0.05/14)
From: UVPAR: fast detection of functional shifts in duplicate genes
ARI1 | ARI2 | ANKIB1 | PARC | PAUL | IBRDC1 | PARKIN | XAP3 | RNF144 | IBRDC2 | DORFIN | IBRDC3 | ARA54 | TRIAD3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ARI1 | -- | 15/20 | 0/6 | 4/6 | 0/14 | 0/3 | 2/9 | 4/9 | 13/20 | 0/6 | 0/3 | 0/6 | 0/6 | 2/6 |
ARI2 | 15/20 | -- | 4/6 | 5/6 | 0/10 | 2/3 | 4/10 | 5/9 | 3/15 | 4/15 | 1/10 | 0/10 | 1/10 | 3/6 |
ANKIB1 | 0/6 | 4/6 | -- | 0/3 | 2/3 | 0/3 | 1/3 | 0/5 | 3/6 | 4/6 | 0/6 | 0/6 | 0/3 | 3/6 |
PARC | 4/6 | 5/6 | 0/3 | -- | 0/3 | 0/1 | 2/3 | 2/3 | 0/6 | 1/6 | 0/3 | 0/3 | 2/6 | 0/3 |
PAUL | 0/14 | 0/10 | 2/3 | 0/3 | -- | 2/3 | 0/3 | 6/9 | 0/10 | 1/10 | 0/3 | 0/3 | 0/3 | 2/3 |
IBRDC1 | 0/3 | 2/3 | 0/3 | 0/1 | 2/3 | -- | 0/1 | 0/5 | 1/3 | 0/3 | 2/3 | 0/3 | 0/1 | 0/3 |
PARKIN | 2/9 | 4/10 | 1/3 | 2/3 | 0/3 | 0/1 | -- | 0/1 | 2/6 | 1/6 | 2/6 | 2/6 | 1/6 | 0/3 |
XAP3 | 4/9 | 5/9 | 0/5 | 2/3 | 6/9 | 0/5 | 0/1 | -- | 3/9 | 0/5 | 0/1 | 2/5 | 0/3 | 3/5 |
RNF144 | 13/20 | 3/15 | 3/6 | 0/6 | 0/10 | 1/3 | 2/6 | 3/9 | -- | 0/6 | 0/6 | 1/6 | 3/6 | 0/6 |
IBRDC2 | 0/6 | 4/15 | 4/6 | 1/6 | 1/10 | 0/3 | 1/6 | 0/5 | 0/6 | -- | 1/6 | 1/6 | 1/6 | 4/6 |
DORFIN | 0/3 | 1/10 | 0/6 | 0/3 | 0/3 | 2/3 | 2/6 | 0/1 | 0/6 | 1/6 | -- | 3/6 | 0/6 | 0/6 |
IBRDC3 | 0/6 | 0/10 | 0/6 | 0/3 | 0/3 | 0/3 | 2/6 | 2/5 | 1/6 | 1/6 | 3/6 | -- | 1/6 | 1/6 |
ARA54 | 0/6 | 1/10 | 0/3 | 2/6 | 0/3 | 0/1 | 1/6 | 0/3 | 3/6 | 1/6 | 0/6 | 1/6 | -- | 0/3 |
TRIAD3 | 2/6 | 3/6 | 3/6 | 0/3 | 2/3 | 0/3 | 0/3 | 3/5 | 0/6 | 4/6 | 0/6 | 1/6 | 0/3 | -- |
TOTAL | 40/114 | 47/130 | 17/62 | 16/52 | 13/77 | 7/35 | 17/63 | 25/69 | 29/105 | 18/87 | 9/65 | 11/72 | 9/65 | 18/62 |
% | 35.1 | 36.2 | 27.4 | 30.8 | 16.9 | 20.0 | 27.0 | 36.2 | 27.6 | 20.7 | 13.8 | 15.3 | 13.8 | 29.0 |
p | ns | 0.0022 | ns | ns | ns | ns | ns | ns | ns | ns | ns | ns | ns | ns |