From: LS-NMF: A modified non-negative matrix factorization algorithm utilizing uncertainty estimates
Coregulation Groups | ||
---|---|---|
Group | KEGG Pathway | Genes |
1 | glucose fermentation | ADH5 ALD5 ADH4 ADH2 ADH1 ALD4 |
2 | phenylalanine degradation | ADH5 ARO10 ADH4 ARO9 ADH2 ADH1 |
3 | sulfate assimilation pathway II | MET10 MET3 ECM17 MET14 MET17 MET16 |
4 | gluconeogenesis | TDH2 PCK1 YMR323W ERR1 ERR2 |
5 | serine-isocitrate lyase pathway | CIT2 ACO1 YMR323W ERR1 ERR2 |
6 | TCA cycle, aerobic respiration | CIT2 KGD2 ACO1 IDH1 IDH2 |
7 | tryptophan degradation | ADH5 ARO10 ADH4 ADH2 ADH1 |
8 | glycolysis | TDH2 YMR323W ERR1 ERR2 |
9 | histidine biosynthesis | HIS7 HIS4 HIS5 HIS3 |
10 | leucine biosynthesis | LEU2 LEU1 BAT1 LEU4 |
11 | tryptophan degradation via kynurenine | BNA4 BNA1 BNA2 BNA5 |