Skip to main content

Table 5 KL distance between distributions of amino acids in proximal and internal positions (PDB_SELECT set).

From: Protein secondary structure prediction for a single-sequence using hidden semi-Markov models

KL-dis N1 N2 N3 N4 C4 C3 C2 C1
α-Helix 0.402 0.194 0.100 0.053 0.018 0.018 0.020 0.036
β-Strand 0.047 0.025 0.019 - - 0.021 0.039 0.074
Loop 0.045 0.019 0.008 0.003 0.004 0.008 0.026 0.028