Table 5 KL distance between distributions of amino acids in proximal and internal positions (PDB_SELECT set).
From: Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
KL-dis | N1 | N2 | N3 | N4 | C4 | C3 | C2 | C1 |
|---|---|---|---|---|---|---|---|---|
α-Helix | 0.402 | 0.194 | 0.100 | 0.053 | 0.018 | 0.018 | 0.020 | 0.036 |
β-Strand | 0.047 | 0.025 | 0.019 | - | - | 0.021 | 0.039 | 0.074 |
Loop | 0.045 | 0.019 | 0.008 | 0.003 | 0.004 | 0.008 | 0.026 | 0.028 |