Table 6 Position specific correlations as characterized by the χ2 measure in α-helix proximal positions (PDB_SELECT set).
From: Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
χ 2 | i - 5 | i - 4 | i - 3 | i - 2 | i - 1 | i + 1 | i + 2 | i + 3 | i + 4 | i + 5 |
|---|---|---|---|---|---|---|---|---|---|---|
N1 | 380.33 | 491.35 | 416.40 | 524.46 | 708.76 | 770.43 | 982.18 | 875.59 | 1132.54 | 487.41 |
N2 | 410.29 | 409.30 | 637.47 | 1029.24 | 770.43 | 805.38 | 993.92 | 619.44 | 872.68 | 594.32 |
N3 | 421.77 | 591.87 | 2000.33 | 731.30 | 661.04 | 702.25 | 844.97 | 697.18 | 694.83 | 652.90 |
N4 | 538.17 | 482.28 | 552.22 | 649.11 | 614.21 | 470.58 | 827.26 | 465.17 | 1055.63 | 468.99 |
C4 | 604.79 | 830.18 | 696.89 | 1082.25 | 481.05 | 463.31 | 933.17 | 578.54 | 657.20 | 527.83 |
C3 | 628.98 | 963.03 | 632.99 | 1181.51 | 497.00 | 527.86 | 903.81 | 485.95 | 443.62 | 370.97 |
C2 | 549.77 | 1261.04 | 624.90 | 1270.42 | 603.44 | 717.04 | 591.22 | 507.21 | 397.44 | 378.79 |
C1 | 563.37 | 1213.12 | 714.48 | 1300.46 | 810.35 | 1266.49 | 631.45 | 482.92 | 476.19 | 454.61 |