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Table 2 PE prediction: three-class problem. Accuracy estimates with 95% confidence intervals and SOV. A * in the first three columns of a row indicates whether the results are obtained augmenting the network input with secondary structure predicted by Porter (P), hydrophobicity profile using the interactivity scale of [20] (H) and using second stage filtering network (F).

From: A two-stage approach for improved prediction of residue contact maps

P H F Q 3 Q 0 Q 1 Q 2 SOV
- - - 55.8 ± .5 63.7 ± .5 35.5 ± .4 67.6 ± .6 38.3
- - * 56.2 ± .5 61.6 ± .6 40.6 ± .5 65.8 ± .6 40.3
* - - 56.3 ± .6 65.8 ± .6 36.9 ± .5 65.5 ± .6 42.1
* - * 56.6 ± .6 64.1 ± .6 41.1 ± .4 63.9 ± .6 43.6
* * - 56.4 ± .5 65.2 ± .6 36.8 ± .4 66.4 ± .6 42.6
* * * 56.7 ± .5 63.3 ± .6 41.4 ± .4 64.6 ± .6 44.0
baseline 39.8 ± .4 50.6 ± .5 8.5 ± .2 59.3 ± .6 -