Table 6 Performance results for contact map prediction. Contact threshold: 12 Ã…. Accuracy, coverage and F1 (as %) for 12 Ã… contact map predictor for distance separations greater than 5, 11 and 23 amino acids.
From: A two-stage approach for improved prediction of residue contact maps
|  | |i - j| ≥ 6 | |i - j| ≥ 12 | |i - j| ≥ 24 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | P | R | F1 | P nc | P | R | F1 | P nc | P | R | F1 | P nc |
MA | 60.4 | 10.6 | 18.1 | 87.2 | 55.8 | 0.1 | 0.1 | 87.8 | 38.9 | 0.03 | 0.06 | 88.8 |
MA_PE | 49.5 | 24.5 | 32.8 | 88.6 | 39.4 | 16.8 | 23.6 | 89.3 | 34.5 | 13.6 | 19.5 | 89.9 |
MA_SS_ACC | 61.6 | 19.6 | 29.7 | 88.2 | 48.9 | 7.5 | 13.1 | 88.5 | 40.2 | 2.8 | 5.3 | 89.0 |
MA_SS_ACC_PE | 54.2 | 23.5 | 32.8 | 88.6 | 42.2 | 14.6 | 21.7 | 89.2 | 36.7 | 10.9 | 16.8 | 89.7 |