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Table 6 Performance results for contact map prediction. Contact threshold: 12 Å. Accuracy, coverage and F1 (as %) for 12 Å contact map predictor for distance separations greater than 5, 11 and 23 amino acids.

From: A two-stage approach for improved prediction of residue contact maps

  |i - j| ≥ 6 |i - j| ≥ 12 |i - j| ≥ 24
  P R F1 P nc P R F1 P nc P R F1 P nc
MA 60.4 10.6 18.1 87.2 55.8 0.1 0.1 87.8 38.9 0.03 0.06 88.8
MA_PE 49.5 24.5 32.8 88.6 39.4 16.8 23.6 89.3 34.5 13.6 19.5 89.9
MA_SS_ACC 61.6 19.6 29.7 88.2 48.9 7.5 13.1 88.5 40.2 2.8 5.3 89.0
MA_SS_ACC_PE 54.2 23.5 32.8 88.6 42.2 14.6 21.7 89.2 36.7 10.9 16.8 89.7