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Table 1 Biomarker genes for the different muscular dystrophies. Biomarker genes selected at the 5% confidence level from temporal Hotelling pairwise tests, whereby each strain of muscular dystrophy is tested for significant differences with each of the other strains.

From: Exploiting the full power of temporal gene expression profiling through a new statistical test: Application to the analysis of muscular dystrophy data

Strain

GenBank Accession

P-values

Symbol

  

MDX vs WT

MDX vs BSG

MDX vs GSG

BSG vs WT

GSG vs WT

BSG vs GSG

 

MDX

NM_008322

5.12E-06

2.56E-04

3.45E-05

4.52E-01

5.80E-01

7.19E-01

Idh2

 

AF192382

1.05E-02

2.20E-03

5.09E-09

6.03E-01

1.30E-03

1.55E-01

Prnd

 

NM_016861

3.27E-06

2.56E-04

2.63E-04

6.78E-01

7.60E-01

8.18E-01

Pdliml

 

Y13832

3.57E-02

3.02E-02

2.91E-06

2.90E-01

1.79E-05

2.85E-01

Gtl2

 

AJ277114

1.63E-03

2.68E-03

2.91E-06

2.30E-01

1.36E-02

5.12E-01

Maged2

 

NM_008517

2.58E-04

4.91E-04

3.95E-03

7.06E-01

9.17E-01

3.90E-01

Lta4h

 

NM_021467

3.87E-03

2.88E-02

2.49E-02

1.74E-01

8.79E-01

6.31E-01

Tnnil

 

NM_011812

3.00E-02

2.66E-02

7.89E-04

9.97E-01

9.98E-01

l.OOE+00

FblnS

BSG

NM_019446

8.24E-01

5.63E-03

7.65E-01

4.15E-02

8.54E-01

2.06E-02

Barhll

 

NM_010902

4.65E-01

1.68E-02

6.75E-01

2.19E-03

4.25E-01

6.89E-03

Nfe212

 

NM_009536

5.30E-01

2.76E-03

6.46E-01

5.09E-03

9.70E-01

2.06E-02

Ywhae

 

NM_020329

7.23E-01

3.02E-02

7.86E-01

3.51E-03

7.98E-01

2.96E-02

Dolppl

 

NM_010074

9.57E-01

2.92E-02

4.37E-01

3.04E-02

3.45E-01

3.19E-02

Dpp4

 

NM_016755

9.71E-01

4.26E-02

9.39E-01

4.50E-02

9.83E-01

3.41E-02

Atp5j

 

NM_021291

5.10E-01

4.25E-02

6.93E-01

3.25E-02

9.54E-01

4.74E-02

Slc7a9

 

J03783

8.29E-01

4.43E-02

9.67E-01

4.53E-02

7.68E-01

2.92E-02

116

GSG

NM.009538

3.72E-01

7.22E-01

2.75E-12

1.67E-01

< 1.00E-12

2.06E-02

Plagll

 

NM_015784

9.26E-01

6.22E-02

3.06E-09

l.OOE-02

5.71E-09

3.38E-02

Postn

 

NM_016762

7.33E-02

9.23E-01

4.18E-10

7.13E-01

8.45E-04

2.21E-03

Matn2

 

M94308

6.28E-01

1.49E-01

1.97E-06

3.32E-01

4.69E-07

4.18E-06

Unknown

 

M15442

9.35E-01

8.40E-01

9.02E-07

4.77E-01

2.52E-05

2.90E-03

Plpl

 

NM_009079

9.10E-02

8.54E-01

1.30E-05

6.10E-01

4.80E-02

5.89E-03

Rpl22

 

AB020886

5.50E-01

8.89E-01

3.10E-04

4.31E-01

1.68E-02

3.38E-02

Akapl2

 

NM_007429

5.86E-01

9.90E-01

2.42E-02

7.02E-01

4.75E-04

1.82E-02

Agtr2

 

NM_008252

6.77E-01

3.70E-01

8.78E-03

3.31E-01

1.04E-02

2.90E-03

Hmgb2

 

AL391037

9.52E-01

9.91E-01

2.92E-02

9.14E-01

2.47E-02

4.23E-02

Palmd