Table 3 PC7 Tissue Partitioning and Ordering. Partitioning and ordering of tissues into sets UP 7 (n = 51) and DOWN 7 (n = 48) sets found to have significant expression differences for H 7 and L 7 at test1Thresh = 0.05. Tissues within groups are ordered by decreasing abs (mean (H 7 )–mean(L 7 )), which has the effect of placing the most significantly affected tissues at the top of each list. The most significant tissues in UP 7 are at the left of Figure 2, and the most significant conditions in DOWN 7 are at the right of Figure 2.
From: Mining gene expression data by interpreting principal components
UP7 | DOWN7 |
|---|---|
SmoothMuscle | PB-CD19+Bcells |
SmoothMuscle | PB-CD19+Bcells |
CardiacMyocytes | PB-BDCA4+Dentritic_Cells |
ADIPOCYTE | PB-BDCA4+Dentritic_Cells |
ADIPOCYTE | lymphomaburkittsRaji |
CardiacMyocytes | lymphomaburkittsDaudi |
TestisGermCell | lymphomaburkittsDaudi |
bronchialepithelialcells | lymphomaburkittsRaji |
bronchialepithelialcells | PB-CD56+NKCells |
PLACENTA | bonemarrow |
PLACENTA | bonemarrow |
TestisInterstitial | PB-CD56+NKCells |
UterusCorpus | leukemiapromyelocytic(hl60) |
Uterus | 721_B_lymphoblasts |
FetalThyroid | Tonsil |
OlfactoryBulb | Tonsil |
TestisLeydigCell | WHOLEBLOOD |
UterusCorpus | 721_B_lymphoblasts |
FetalThyroid | leukemiapromyelocytic(hl60) |
atrioventricularnode | WHOLEBLOOD |
TestisInterstitial | thymus |
TestisLeydigCell | PB-CD8+Tcells |
TestisSeminiferousTubule | PB-CD8+Tcells |
atrioventricularnode | thymus |
DRG | lymphnode |
Fetallung | Heart |
Uterus | lymphnode |
Ciliaryganglion | PB-CD14+Monocytes |
TestisGermCell | PB-CD4+Tcells |
AdrenalCortex | PB-CD4+Tcells |
Fetallung | PB-CD14+Monocytes |
Ciliaryganglion | BM-CD71+EarlyErythroid |
DRG | BM-CD34+ |
TONGUE | Liver |
SuperiorCervicalGanglion | Heart |
Ovary | BM-CD71+EarlyErythroid |
TestisSeminiferousTubule | BM-CD34+ |
Skin | BM-CD105+Endothelial |
OlfactoryBulb | salivarygland |
TONGUE | leukemialymphoblastic(molt4) |
Ovary | Liver |
TrigeminalGanglion | Lung |
AdrenalCortex | Lung |
PancreaticIslets | leukemialymphoblastic(molt4) |
Skin | BM-CD105+Endothelial |
Fetalbrain | BM-CD33+Myeloid |
TrigeminalGanglion | salivarygland |
Fetalbrain | BM-CD33+Myeloid |
Amygdala | Â |
SuperiorCervicalGanglion | Â |
PrefrontalCortex | Â |