Table 1 Taxa currently included in PhIGs

Homo sapiens

Primates

Ensembl 22.34d.1

http://www.ensembl.org

Pan troglodytes

Primates

Ensembl 22.1.1

http://www.ensembl.org

Mus musculus

Rodentia

Ensembl 22.32b.1

http://www.ensembl.org

Rattus norvegicus

Rodentia

Ensembl 22.3b.1

http://www.ensembl.org

Gallus gallus

Aves

Ensembl 22.1.1

http://www.ensembl.org

Takifugu rubripes

Pisces

Ensembl 22.2c.1

http://www.ensembl.org

Danio rerio

Pisces

Ensembl 22.3b.1

http://www.ensembl.org

Ciona intestinalis

Urochordata

JGI ciona4

http://genome.jgi-psf.org

Drosophila melanogaster

Arthropoda

Ensembl 22.3a.1

http://www.ensembl.org

Anopheles gambiae

Arthropoda

Ensembl 22.2b.1

http://www.ensembl.org

Caenorhabditis elegans

Nematoda

Ensembl 22.116a.1

http://www.ensembl.org

Caenorhabditis briggsae

Nematoda

Ensembl 24.24.1

http://www.ensembl.org

Ustilago maydis

Basidiomycota

Broad release 2

http://www.broad.mit.edu/annotation/fungi/fgi/

Phanerochaete chrysosporium

Basidiomycota

JGI whiterot1

http://genome.jgi-psf.org

Cryptococcus neoformans

Basidiomycota

TIGR CNA1

http://www.tigr.org/tdb/fungal/

Schizosaccharomyces pombe

Ascomycota

Pompep version 19

http://www.sanger.ac.uk/Projects/S_pombe/

Aspergillus nidulans

Ascomycota

Broad release 1.3

http://www.broad.mit.edu/annotation/fungi/fgi/

Fusarium graminearum

Ascomycota

Broad release 1.1

http://www.broad.mit.edu/annotation/fungi/fgi/

Trichoderma reesei

Ascomycota

JGI trire1

http://genome.jgi-psf.org

Magnaporthe grisea

Ascomycota

Broad release 2.4

http://www.broad.mit.edu/annotation/fungi/fgi/

Neurospora crassa

Ascomycota

Broad release 3

http://www.broad.mit.edu/annotation/fungi/fgi/

Candida albicans

Ascomycota

Stanford release 19

http://www-sequence.stanford.edu/group/candida/

Saccharomyces cerevisiae

Ascomycota

Saccharomyces Genome Database

http://www.yeastgenome.org/