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Table 1 Taxa currently included in PhIGs

From: A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database

Species Taxonomy Genome source URL
Homo sapiens Primates Ensembl 22.34d.1 http://www.ensembl.org
Pan troglodytes Primates Ensembl 22.1.1 http://www.ensembl.org
Mus musculus Rodentia Ensembl 22.32b.1 http://www.ensembl.org
Rattus norvegicus Rodentia Ensembl 22.3b.1 http://www.ensembl.org
Gallus gallus Aves Ensembl 22.1.1 http://www.ensembl.org
Takifugu rubripes Pisces Ensembl 22.2c.1 http://www.ensembl.org
Danio rerio Pisces Ensembl 22.3b.1 http://www.ensembl.org
Ciona intestinalis Urochordata JGI ciona4 http://genome.jgi-psf.org
Drosophila melanogaster Arthropoda Ensembl 22.3a.1 http://www.ensembl.org
Anopheles gambiae Arthropoda Ensembl 22.2b.1 http://www.ensembl.org
Caenorhabditis elegans Nematoda Ensembl 22.116a.1 http://www.ensembl.org
Caenorhabditis briggsae Nematoda Ensembl 24.24.1 http://www.ensembl.org
Ustilago maydis Basidiomycota Broad release 2 http://www.broad.mit.edu/annotation/fungi/fgi/
Phanerochaete chrysosporium Basidiomycota JGI whiterot1 http://genome.jgi-psf.org
Cryptococcus neoformans Basidiomycota TIGR CNA1 http://www.tigr.org/tdb/fungal/
Schizosaccharomyces pombe Ascomycota Pompep version 19 http://www.sanger.ac.uk/Projects/S_pombe/
Aspergillus nidulans Ascomycota Broad release 1.3 http://www.broad.mit.edu/annotation/fungi/fgi/
Fusarium graminearum Ascomycota Broad release 1.1 http://www.broad.mit.edu/annotation/fungi/fgi/
Trichoderma reesei Ascomycota JGI trire1 http://genome.jgi-psf.org
Magnaporthe grisea Ascomycota Broad release 2.4 http://www.broad.mit.edu/annotation/fungi/fgi/
Neurospora crassa Ascomycota Broad release 3 http://www.broad.mit.edu/annotation/fungi/fgi/
Candida albicans Ascomycota Stanford release 19 http://www-sequence.stanford.edu/group/candida/
Saccharomyces cerevisiae Ascomycota Saccharomyces Genome Database http://www.yeastgenome.org/