Table 4 Comparison of Expresso analysis and MEV t test. We compare the number of genes identified as differentially expressed by Expresso analysis and the MEV t-test. Counts for both up-expressed and down-expressed genes, as well as all four genotypes of Experiment 2, are reported. The first three analyses — the GP model, the GOT model, and the MEV t-test — take the IIV_TLSF data as input. For point of comparison, the last analysis uses the GP model on MIV input.

From: The statistics of identifying differentially expressed genes in Expresso and TM4: a comparison