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Table 1 Selected significant motif combinations from Cold down-regulated metabolism genes in shoots

From: XcisClique: analysis of regulatory bicliques

Biclique Motifset Geneset p- value
Biclique 203 ABRELATERD1, ASF1MOTIFCAMV, C/EBP, Fed-SA-induced, GT1CONSENSUS, IBOX, MYBCORE, MYCATERD1, MYCATRD22, MYCCONSENSUSAT, RAV1AAT, WBOXATNPR1 At1g55920, At4g15550, At5g24160 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBamrtHrhAL1wy0L2yHvtyaeHbnfgDOvwBHrxAJfwnaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaWaaeGaeaaakeaaimaacqWFlecsaaa@3763@ tail = 5.l7e – 03,pSAV (Roots) = 3.86e – 02, pSAV (Shoots) = 6.60e – 03
Biclique 35 ABRELATERD1, ASF1MOTIFCAMV, C/EBP, Fed-AtMyb4, GAREAT, GT1CONSENSUS HSE2-mut, IBOX, MYB1AT, MYB2CONSENSUSAT, MYBCORE, MYCCONSENSUSAT, RAV1AAT, TBOXATGAPB, WBOXATNPR1 At1gl6410,At3g01500, At5g14740,At5g18170 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBamrtHrhAL1wy0L2yHvtyaeHbnfgDOvwBHrxAJfwnaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaWaaeGaeaaakeaaimaacqWFlecsaaa@3763@ tail = 1.58e – 05, pSAV (Roots) = 1.15e – 01,p sav (Shoots) = 4.28e – 02