Figure 7From: Meta-analysis discovery of tissue-specific DNA sequence motifs from mammalian gene expression dataSample MultiFinder output for the skeletal muscle gene expression cluster. Shown are just the top twenty most group specific motifs from the combined results from the four individual motif finders; many more motifs were discovered than are shown. The columns shown are as follows: group specificity score along with the motif ranking according to group specificity; site specificity score and the motif rank according to site specificity; number of motif occurrences found in the input sequence set; mean and standard deviation of the number of motif occurrences in each sequence within the input set; correlation coefficient for the most similar TRANSFAC motif and the name of the TRANSFAC motif; the motif finders (AlignACE (AA), BioProspector (BP), MDscan (MD) and MEME (ME)) that found the motif; whether a given motif contained a tandem repeat (TR) or palindromic repeat (PAL); and the sequence logo of the discovered motif.Back to article page