Figure 7
From: Evaluation of methods for oligonucleotide array data via quantitative real-time PCR
BA-GC and Li-Wong perform well together. See Table 5 for notation. Combinations that used both BA-GC and the Li-Wong summary method perform consistently well (green curves). Replacing BA-GC with subtractMM was not as good (yellow curves). Replacing the Li-Wong with medianpolish is also arguably less effective (blue curves). Note: BA-GC could not be combined with subtractMM, because this resulted in negative values.