BMC Bioinformatics

Table 2 The analysis of one-group DNA pooling data in Example 1 (Part 2: The allele frequency estimate (AFE) and standard error (s.e.))

From: PDA: Pooled DNA analyzer

		Unadjusted		CPA_H adjustment		CPA_U adjustment		CPA_G adjustment
OBS	SNP	AFE	s.e.	AFE	s.e.	AFE	s.e.	AFE	s.e.
1	680	0.945	0.029	0.932	0.033	0.934	0.032	0.932	0.032
2	659	0.034	0.024	0.044	0.027	0.050	0.028	0.049	0.028
3	696	0.163	0.048	0.228	0.054	0.236	0.055	0.235	0.055
4	700	0.643	0.062	0.673	0.061	0.679	0.060	0.677	0.060
5	645	0.817	0.050	0.716	0.058	0.714	0.058	0.719	0.058
6	639	0.806	0.051	0.644	0.062	0.641	0.062	0.647	0.062

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ISSN: 1471-2105

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