Table 1 Classification error based on Network Links, Transcription Profile and Degree Error Estimates (ten-fold cross validation ten times, using ten different seeds)
From: Characterizing disease states from topological properties of transcriptional regulatory networks
Dataset | Network Link | Gene Expression | (In) Degree |
|---|---|---|---|
Leukemia | |||
ALL/AML[23] | 9% | 4% | 4% |
Myeloid Leukemia [43] | 6% | 0% | 0% |
Breast Cancer | |||
Duke [38] | 23% | 17% | 25.5% |
Dutch [39, 44, 55] | 43% | 42% | 39.8% |
Paired Cell Types | |||
Renal Carcinoma vs. Normal Kidney [37] | 0% | 0% | 0% |
Monocytes vs. Granulocytes [36] | 0% | 0% | 0% |