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Figure 3 | BMC Bioinformatics

Figure 3

From: Improving the specificity of high-throughput ortholog prediction

Figure 3

Ratio 1 (R1) ratio distribution curves for selected alignment characteristics. Higher quality mouse-rat-human ortholog sequence sets were analyzed to devise the gap-masking and sequence trimming approaches. These methods were evaluated for the introduction of ratio distribution biases for selected alignment characteristics such as identity and gap length. Ratio distribution curves were plotted for several characteristics. No obvious bias was observed through the introduction of our gap masking approach or alignment trimming.

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