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Table 1 Summarization of PTP and TPT motifs for various Affymetrix arrays

From: Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations

  PTP motifs TPT motifs
array p-set pairs probesets % probesets transcripts probesets % probesets
hgu133Plus2 78504 18182 33.29% 11576 7285 13.34%
hgu133a 54762 9666 43.51% 9288 5289 23.81%
hgu133b 6218 3197 14.16% 3241 1526 6.76%
hgu95c 70156 1620 12.88% 3201 928 7.38%
hgu95b 2930 1729 13.77% 2256 1042 8.30%
hgu95e 2984 1515 12.05% 2113 897 7.13%
hgu95d 1444 612 4.87% 1765 502 3.99%
hgu95a 15320 3880 31.32% 7309 3085 24.91%
moe430_2 30552 14234 31.61% 4995 2439 5.42%
moe430a 21686 9808 43.35% 4142 1929 8.53%
moe430b 4224 2647 11.76% 1155 517 2.30%
mgu74av2 17142 2843 22.89% 3221 1184 9.53%
mgu74bv2 3606 2302 18.55% 1175 521 4.20%
mgu74cv2 1158 636 5.36% 888 243 2.05%
Rat230_2 7134 4818 15.52% 2821 1011 3.26%
rae230a 2812 2056 12.96% 2404 792 4.99%
rae230b 1792 1293 8.46% 581 226 1.48%
rgu34b 908 680 7.79% 681 181 2.07%
rgu34c 1382 769 8.81% 745 243 2.78%
rgu34a 14818 3373 38.59% 2302 752 8.60%
rnu34a 1050 600 47.51% 171 81 6.41%
rtu34a 1130 442 45.47% 255 120 12.35%