Skip to main content

Advertisement

Table 3 Performance evaluation using simulated palindromic TFBS. Performance comparison of OMiMa (1-L-0) with PWM, 1stMM, and PVLMM (order 1 and depth 1) for predicting two simulated TFBS A and B. The performance was measured as the maximum Mc achieved by each model.

From: Optimized mixed Markov models for motif identification

Motif PWM 1stMM PVLMM OMiMa
A 0.306 0.414 0.807 0.914
B 0.253 0.428 0.647 0.794