Table 1 Comparison of entropy scores by ROKU and Schug's method. Probesets and two entropy scores estimated by ROKU and Schug's method are shown. The numbers in parenthesis are the ranks of the probesets. One can easily rank all probesets by this order using the additional file [see Additional file 1].
From: ROKU: a novel method for identification of tissue-specific genes
Probeset ID | Entropy | H(x') - H(x) | |
|---|---|---|---|
| Â | H(x') | H(x) | Â |
Probesets with the lowest (H( x ') - H( x )) scores | |||
206319_s_at | 1.950 (482) | 4.235 (2347) | -2.285 |
215622_x_at | 1.499 (295) | 3.698 (1144) | -2.198 |
207636_at | 1.253 (210) | 3.369 (806) | -2.116 |
206587_at | 2.310 (651) | 4.402 (3048) | -2.092 |
206945_at | 1.659 (352) | 3.742 (1222) | -2.083 |
213332_at | 2.674 (861) | 4.755 (6637) | -2.081 |
215189_at | 1.706 (371) | 3.784 (1292) | -2.078 |
207053_at | 2.321 (653) | 4.359 (2830) | -2.038 |
207908_at | 1.420 (260) | 3.452 (877) | -2.032 |
214377_s_at | 0.808 (105) | 2.830 (493) | -2.022 |
Probesets with the highest (H( x ') - H( x )) scores | |||
202546_at | 4.955 (22257) | 4.431 (3215) | 0.524 |
201131_s_at | 4.729 (17433) | 4.228 (2311) | 0.501 |
211981_at | 4.746 (18161) | 4.328 (2680) | 0.419 |
202864_s_at | 4.919 (22137) | 4.502 (3668) | 0.417 |
213998_s_at | 4.652 (14417) | 4.259 (2432) | 0.393 |
218839_at | 4.971 (22267) | 4.580 (4284) | 0.391 |
208963_x_at | 4.312 (6836) | 3.930 (1548) | 0.382 |
210474_s_at | 4.985 (22277) | 4.622 (4701) | 0.363 |
213071_at | 4.551 (11124) | 4.196 (2200) | 0.355 |
218361_at | 4.944 (22231) | 4.617 (4642) | 0.326 |