From: In silico identification of putative promoter motifs of White Spot Syndrome Virus
Ā | All WSSV genes (0 or 1 occurrence per individual sequence) | Early WSSV genes (1 occurrence per individual sequence) | Late WSSV genes (1 occurrence per individual sequence) |
---|---|---|---|
100 nt upstream | gtataaa a (TATA box) (61 seqs) tgtttttt (T-rich) (65 seqs) gaggaaga (61 seqs) | gtataaa a (TATA box) ttttttca (T-rich) caacatca | gtataaa a (TATA box) tttgtgta aacc |
200 nt upstream | gtataaa a (TATA box) (112 seqs) ttgttttt (T-rich) (65 seqs) tcctcctc (61 seqs) | agaagagg tatttttt (T-rich) agaaat | gaggaaga tcttttat (T-rich) aaaaatat (A-rich) |