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Table 6 The results of two threading methods

From: Novel knowledge-based mean force potential at the profile level

Method

W0

W1

Ws

Training accuracy

Test accuracy

Residue-threading

4.5

0.5

0.175

78.2%

75.6%

Profile-threading

5

0.4

0.348

82.5%

79.4%

  1. W0, W1 and Ws are the gap-open penalty, gap-extension penalty and the structure factor. The training accuracy and test accuracy are the alignment accuracy on the training set and test set.
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BMC Bioinformatics

ISSN: 1471-2105

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