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Table 3 Genes with altered change calls between d18 pregnant and 10 wk nulliparous glands after adjusting for compartment size changes.

From: Computational expression deconvolution in a complex mammalian organ

Affy ID

Symbol

Gene name

Pre-adj

Post-adj

104587_at

Lama4

laminin, alpha 4

Down

Up

94354_at

Abca1

ATP-binding cassette, sub-family A (ABC1), member 1

Down

Up

93376_at

Bmp2k

BMP2 inducible kinase

Down

Up

93459_s_at

Fzd4

frizzled homolog 4 (Drosophila)

Down

Up

92913_at

Abcd2

ATP-binding cassette, sub-family D (ALD), member 2

Down

Up

98328_at

Tshr

thyroid stimulating hormone receptor

Down

Up

92836_at

Eln

elastin

Down

Up

97172_s_at

Abcc9

ATP-binding cassette, sub-family C (CFTR/MRP), member 9

Down

Up

98019_at

Tgfb1i1

transforming growth factor beta 1 induced transcript 1

Down

Up

100567_at

Fabp4

fatty acid binding protein 4, adipocyte

Down

NC

101887_at

Agt

angiotensinogen

Down

NC

94906_at

Adh1

alcohol dehydrogenase 1 (class I)

Down

NC

161900_f_at

Adrb3

adrenergic receptor, beta 3

Down

NC

94080_at

Sdha

succinate dehydrogenase complex, subunit A, flavoprotein (Fp)

Down

NC

98444_g_at

Lep

leptin

Down

NC

97426_at

Emp1

epithelial membrane protein 1

Down

NC

103549_at

Nes

nestin

Down

NC

92256_at

Ctsb

cathepsin B

Down

NC

97926_s_at

Pparg

peroxisome proliferator activated receptor gamma

Down

NC

97921_at

Agrn

agrin

Up

Down

100733_at

Psma2

proteasome (prosome, macropain) subunit, alpha type 2

Up

Down

95593_at

Golph2

golgi phosphoprotein 2

Up

Down

95286_at

Clu

clusterin

Up

Down

93789_s_at

Sin3b

transcriptional regulator, SIN3B (yeast)

Up

Down

99086_g_at

Usp3

ubiquitin specific protease 3

Up

Down

101137_at

Rps3

ribosomal protein S3

Up

Down

97937_at

Klf5

Kruppel-like factor 5

Up

Down

160129_at

Eef1d

eukaryotic translation elongation factor 1 delta

Up

Down

92544_f_at

Psma3

proteasome (prosome, macropain) subunit, alpha type 3

Up

NC

101446_at

Tpd52l1

tumor protein D52-like 1

Up

NC

94196_at

Ikbkg

inhibitor of kappaB kinase gamma

Up

NC

94404_at

Vps45

vacuolar protein sorting 45 (yeast)

Up

NC

103964_at

Esrra

estrogen related receptor, alpha

Up

NC

98937_at

Tbrg1

transforming growth factor beta regulated gene 1

Up

NC

102918_at

Muc1

mucin 1, transmembrane

Up

NC

94270_at

Krt1-18

keratin complex 1, acidic, gene 18

NC

Down

92550_at

Krt1-19

keratin complex 1, acidic, gene 19

NC

Down

101009_at

Krt2-8

keratin complex 2, basic, gene 8

NC

Down

98110_at

Mdm2

transformed mouse 3T3 cell double minute 2

NC

Down

93536_at

Bax

Bcl2-associated X protein

NC

Down

98433_at

Bid

BH3 interacting domain death agonist

NC

Down

99670_at

Bad

Bcl-associated death promoter

NC

Down

98868_at

Bcl2

B-cell leukemia/lymphoma 2

NC

Down

95611_at

Lpl

lipoprotein lipase

NC

Up

98623_g_at

Igf2

insulin-like growth factor 2

NC

Up

101874_s_at

Prlpe

prolactin-like protein E

NC

Up

104152_at

Stk40

serine/threonine kinase 40

NC

Up

97948_at

Rb1

retinoblastoma 1

NC

Up

99994_at

Cidea

cell death-inducing DNA fragmentation factor, alpha subunit-like effector A

NC

Up