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Table 2 Comparison of nucleotide level prediction accuracy (nPC) of EMD algorithms with different combinations of component algorithms a).

From: EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences

Algorithm

nPC

Algorithm

nPC

Algorithm

nPC

AL

0.178

AL-BP

0.213

AL-BP-MD

0.239

BP

0.201

AL-ME

0.203

AL-BP-ME

0.225

MD

0.228

AL-MS

0.208

AL-BP-MS

0.213

ME

0.199

BP-MD

0.241

AL-MD-ME

0.250

MS

0.206

BP-ME

0.214

AL-MD-MS

0.241

Average

0.202

ME-MS

0.220

AL-ME-MS

0.220

AL-BP-MD-ME

0.254

BP-MS

0.207

BP-MD-ME

0.243

AL-BP-MD-MS

0.244

MD-ME

0.235

BP-MD-MS

0.249

AL-BP-ME-MS

0.232

AL-MD

0.240

BP-ME-MS

0.223

AL-MD-ME-MS

0.252

MD-MS

0.250

MD-ME-MS

0.241

BP-MD-ME-MS

0.248

Average

0.223

Average

0.234

Average

0.246

  

AL-BP-MD-ME-MS

0.254

  1. a) Tested on ECRDB61B-200 data set. b) The best EMD algorithms among those of a given number of component algorithms are highlighted in bold.