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Table 3 The performance (nPC) of EMD-2 algorithms with respect to the number of runs of its component algorithms a).

From: EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences

Algorithm\No. of Runs

5

10

15

20

AL-BP

0.219

0.216

0.219

0.213

AL-ME

0.231

0.231

0.241

0.240

AL-MS

0.182

0.208

0.203

0.203

BP-MD

0.190

0.206

0.197

0.208

BP-ME

0.240

0.242

0.238

0.241

ME-MS

0.210

0.216

0.214

0.213

BP-MS

0.208

0.207

0.207

0.207

MD-ME

0.222

0.233

0.227

0.235

AL-MD

0.236

0.236

0.236

0.250

MD-MS

0.195

0.225

0.220

0.220

Average

0.214

0.222

0.220

0.223

  1. a) ECRDB61B-200 (margin size of 200) data set is used.
  2. b) The nPC value is in bold if it is the best performance among tested for that EMD algorithm.